MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
19428wF2_HT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 193
bases: 2,276,358 bps
CDS: 2,234
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,305
Total number of protein coding genes annotated/found:
2,234
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5023|JADGME010000011.1
SEQF5023_00078
Genome Viewer
NA
AA
498/166
22129-21632
putative protein YpjQ
SEQF5023|JADGME010000011.1
SEQF5023_00079
Genome Viewer
NA
AA
855/285
23002-22148
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00080
Genome Viewer
NA
AA
156/52
23103-22948
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00081
Genome Viewer
NA
AA
1275/425
24364-23090
3-hydroxy-3-methylglutaryl-coenzyme A reductase
SEQF5023|JADGME010000011.1
SEQF5023_00082
Genome Viewer
NA
AA
6603/2201
31091-24489
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00083
Genome Viewer
NA
AA
801/267
31313-32113
Membrane-bound lytic murein transglycosylase F
SEQF5023|JADGME010000011.1
SEQF5023_00084
Genome Viewer
NA
AA
927/309
33080-32154
Exopolyphosphatase
SEQF5023|JADGME010000011.1
SEQF5023_00085
Genome Viewer
NA
AA
1017/339
34209-33193
Tryptophan--tRNA ligase 2
SEQF5023|JADGME010000011.1
SEQF5023_00086
Genome Viewer
NA
AA
1443/481
35927-34485
Sucrose phosphorylase
SEQF5023|JADGME010000011.1
SEQF5023_00087
Genome Viewer
NA
AA
831/277
36773-35943
Diacetylchitobiose uptake system permease protein NgcG
SEQF5023|JADGME010000011.1
SEQF5023_00088
Genome Viewer
NA
AA
879/293
37664-36786
Diacetylchitobiose uptake system permease protein NgcF
SEQF5023|JADGME010000011.1
SEQF5023_00089
Genome Viewer
NA
AA
1275/425
38941-37667
Multiple sugar-binding protein
SEQF5023|JADGME010000011.1
SEQF5023_00090
Genome Viewer
NA
AA
831/277
39090-39920
Arabinose operon regulatory protein
SEQF5023|JADGME010000011.1
SEQF5023_00091
Genome Viewer
NA
AA
1629/543
41539-39911
Oligo-1%2C6-glucosidase
SEQF5023|JADGME010000011.1
SEQF5023_00092
Genome Viewer
NA
AA
1110/370
42661-41552
Oligosaccharides import ATP-binding protein MsmX
SEQF5023|JADGME010000011.1
SEQF5023_00093
Genome Viewer
NA
AA
849/283
43626-42778
Leucine-rich protein
SEQF5023|JADGME010000011.1
SEQF5023_00094
Genome Viewer
NA
AA
1047/349
43750-44796
Manganese efflux system protein MneS
SEQF5023|JADGME010000011.1
SEQF5023_00095
Genome Viewer
NA
AA
519/173
44830-45348
Peptide methionine sulfoxide reductase MsrA
SEQF5023|JADGME010000011.1
SEQF5023_00096
Genome Viewer
NA
AA
168/56
45493-45660
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00097
Genome Viewer
NA
AA
552/184
45791-46342
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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